1. mbQTL::CovFile
    'mbQTL' "CovFile"
  2. mbQTL::SnpFile
    'mbQTL' "SnpFile"
  3. mbQTL::metagenomeSeqObj
    'mbQTL' "metagenomeSeqObj" "MetagenomSeqObj" is an 'MRexperiment' object format of the "microbeAbund" file.
    MRexperiment
  4. mbQTL::microbeAbund
    'mbQTL' "microbiomeAbund" File
  5. mirTarRnaSeq::Combine
    This is data is the mRNA expression across samples and miRNA expression data which is to be investigated in one file. This data set is used in documentation examples.
  6. mirTarRnaSeq::corr_0
    This is data is the mRNA FC and miRNA FC correlation data. This data set is used in documentation examples.
  7. mirTarRnaSeq::final_results
    This is data is the mRNA FC and miRNA FC correlation/interaction data results after filteration. This data set is used in documentation examples.
  8. mirTarRnaSeq::geneVariant
    This is data is the mRNA expression across samples and miRNA expression data which is to be investigated giving directions on which data is miRNA and which is mRNA. This data set is used in documentation examples.
  9. mirTarRnaSeq::inter0
    This is data is the mRNA FC and miRNA FC correlation/interaction original data. This data set is used in documentation examples.
  10. mirTarRnaSeq::mRNA
    This is data is the mRNA expression file. This data set is used in documentation examples.
  11. mirTarRnaSeq::mRNA0_2
    This is data is the mRNA0_2 FC for 0-2 time point. This data set is used in documentation examples.
  12. mirTarRnaSeq::mRNA0_5
    This is data is the mRNA0_5 FC for 0-5 time point. This data set is used in documentation examples.
  13. mirTarRnaSeq::mRNA2_5
    This is data is the mRNA2_5 FC for 2-5 time point. This data set is used in documentation examples.
  14. mirTarRnaSeq::mRNA_fc
    This is data is the combined mRNA FC for all time points. This data set is used in documentation examples.
  15. mirTarRnaSeq::mRNA_fc2
    This data is the mRNA fold change data set for difference or interrelation section. This data set is used in documentation examples.
  16. mirTarRnaSeq::miRNA
    This is data is the miRNA expression file. This data set is used in documentation examples.
  17. mirTarRnaSeq::miRNA0_2
    This is data is the miRNA0_2 FC for 0-2 time point. This data set is used in documentation examples.
  18. mirTarRnaSeq::miRNA0_5
    This is data is the miRNA0_5 FC for 0-5 time point. This data set is used in documentation examples.
  19. mirTarRnaSeq::miRNA2_5
    This is data is the miRNA2_5 FC for 2-5 time point. This data set is used in documentation examples.
  20. mirTarRnaSeq::miRNA_fc
    This is data is the combined miRNA FC for all time points. This data set is used in documentation examples.
  21. mirTarRnaSeq::miRNA_fc2
    This data is the miRNA fold change data set for difference or interrelation section. This data set is used in documentation examples.
  22. mirTarRnaSeq::miRanda
    This is data is the results file from EBV miRanda getInputSpecies function. This data set is used in documentation examples.
  23. mirTarRnaSeq::miRandaM
    This is data is the results file from mouse miRanda getInputSpecies function. This data set is used in documentation examples.
  24. mirTarRnaSeq::outs
    This is data is the output file resulted from time point/conditions background correlation model. This data set is used in documentation examples.
  25. mirTarRnaSeq::outs2
    This is data is the output file resulted from time point/conditions background difference/interelation model. This data set is used in documentation examples.
  26. mirTarRnaSeq::results
    This is data is the output file resulted from time point or conditions or correlation or interrelation model. This data set is used in documentation examples.
  27. mirTarRnaSeq::sig_InterR
    This is data is the output file resulted from time point or conditions experiment for interrelation model after filtering and threshold modification. This data set is used in documentation examples.
  28. mirTarRnaSeq::sig_corrs
    This is data is the output file resulted from time point or conditions experiment for correlation model after filtering and threshold modification. This data set is used in documentation examples.
  29. mirTarRnaSeq::some_model
    This is data is the results file from regression analysis and its estimates. This data set is used in documentation examples.